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Amino Acids, Peptides and Proteins in Organic Chemistry, Volume 1, Origins and Synthesis of Amino Acids

Andrew B. Hughes (Series Editor)
ISBN: 978-3-527-32096-7
734 pages
September 2009
Amino Acids, Peptides and Proteins in Organic Chemistry, Volume 1, Origins and Synthesis of Amino Acids (3527320962) cover image

Description

This is the first of five books in the Amino Acids, Peptides and Proteins in Organic Synthesis series. 

Closing a gap in the literature, this is the only series to cover this important topic in organic and biochemistry. Drawing upon the combined expertise of the international "who's who" in amino acid research, these volumes represent a real benchmark for amino acid chemistry, providing a comprehensive discussion of the occurrence, uses and applications of amino acids and, by extension, their polymeric forms, peptides and proteins.

The practical value of each volume is heightened by the inclusion of experimental procedures.

 

The 5 volumes cover the following topics:

Volume 1: Origins and Synthesis of Amino Acids

Volume 2: Modified Amino Acids, Organocatalysis and Enzymes

Volume 3: Building Blocks, Catalysis and Coupling Chemistry

Volume 4: Protection Reactions, Medicinal Chemistry, Combinatorial Synthesis

Volume 5: Analysis and Function of Amino Acids and Peptides

 

This first volume is clearly divided into two parts. The first section deals with the origins of extraterrestrial and "terrestrial" amino acids and their evolution. The second part looks at their production and synthesis, including recent developments in the synthesis of ß-Amino acids. 

 

Originally planned as a six volume series, Amino Acids, Peptides and Proteins in Organic Chemistry now completes with five volumes but remains comprehensive in both scope and coverage.

Further information about the 5 Volume Set and purchasing details can be viewed here.

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Table of Contents

List of Contributors XVII

Part One Origins of Amino Acids 1

1 Extraterrestrial Amino Acids 3
Z. Martins and M.A. Sephton

1.1 Introduction 3

1.2 ISM 6

1.3 Comets 9

1.4 Meteorites 11

1.5 Micrometeorites and IDPs 23

1.6 Mars 23

1.7 Delivery of Extraterrestrial Amino Acid to the Earth and its Importance to the Origin of Life 24

1.8 Conclusions 26

References 27

2 ‘‘Terrestrial’’ Amino Acids and their Evolution 43
Stephen Freeland

2.1 Introduction 43

2.2 What are the 20 ‘‘Terrestrial’’ Amino Acids? 44

2.3 What do We Know about the Evolution of the Standard Amino Acid Alphabet? 49

2.4 Amino Acids that Life Passed Over: A Role for Natural Selection? 58

2.5 Why Does Life Genetically Encode L-Amino Acids? 64

2.6 Summary, Synthesis, and Conclusions 64

References 66

Part Two Production/Synthesis of Amino Acids 77

3 Use of Enzymes in the Synthesis of Amino Acids 79
Theo Sonke, Bernard Kaptein, and Hans E. Schoemaker

3.1 Introduction 79

3.2 Chemo-Enzymatic Processes to Enantiomerically Pure Amino Acids 80

3.3 Acylase Process 81

3.4 Amidase Process 83

3.5 Hydantoinase Process 88

3.6 Ammonia Lyase Processes 90

3.7 Aminotransferase Process 94

3.8 AADH Process 99

3.9 Conclusions 102

References 103

4 b-Amino Acid Biosynthesis 119
Peter Spiteller

4.1 Introduction 119

4.2 Biosynthesis of b-Amino Acids 120

4.3 Conclusions and Future Prospects 154

References 155

5 Methods for the Chemical Synthesis of Noncoded a-Amino Acids found in Natural Product Peptides 163
Stephen A. Habay, Steve S. Park, Steven M. Kennedy, and A. Richard Chamberlin

5.1 Introduction 163

5.2 Noncoded CAAs 164

5.3 Noncoded Amino Acids by Chemical Modification of Coded Amino Acids 185

5.4 Noncoded Amino Acids with Elaborate Side-Chains 205

5.5 Conclusions 226

References 226

6 Synthesis of N-Alkyl Amino Acids 245
Luigi Aurelio and Andrew B. Hughes

6.1 Introduction 245

6.2 N-Methylation via Alkylation 246

6.3 N-Methylation via Schiff .s Base Reduction 259

6.4 N-Methylation by Novel Methods 265

6.5 N-Alkylation of Amino Acids 280

References 286

7 Recent Developments in the Synthesis of b-Amino Acids 291
Yamir Bandala and Eusebio Juaristi

7.1 Introduction 291

7.2 Synthesis of b-Amino Acids by Homologation of a-Amino Acids 291

7.3 Chiral Pool: Enantioselective Synthesis of b-Amino Acids from Aspartic Acid, Asparagine, and Derivatives 298

7.4 Synthesis of b-Amino Acids by Conjugate Addition of Nitrogen Nucleophiles to Enones 300

7.5 Synthesis of b-Amino Acids via 1,3-Dipolar Cycloaddition 312

7.6 Synthesis of b-Amino Acids by Nucleophilic Additions 316

7.7 Synthesis of b-Amino Acids by Diverse Addition or Substitution Reactions 328

7.8 Synthesis of b-Amino Acids by Stereoselective Hydrogenation of Prochiral 3-Aminoacrylates and Derivatives 330

7.9 Synthesis of b-Amino Acids by use of Chiral Auxiliaries: Stereoselective Alkylation 334

7.10 Synthesis of b-Amino Acids via Radical Reactions 338

7.11 Miscellaneous Methods for the Synthesis of b-Amino Acids 340

7.12 Conclusions 347

7.13 Experimental Procedures 348

8 Synthesis of Carbocyclic b-Amino Acids 367
Loránd Kiss, Enik}o Forró, and Ferenc Fülöp

8.1 Introduction 367

8.2 Synthesis of Carbocyclic b-Amino Acids 368

8.3 Synthesis of Functionalized Carbocyclic b-Amino Acid Derivatives 385

8.4 Enzymatic Routes to Carbocyclic b-Amino Acids 393

8.5 Conclusions and Outlook 398

8.6 Experimental Procedures 399

References 405

9 Synthetic Approaches to a,b-Diamino Acids 411
Alma Viso and Roberto Fernández de la Pradilla

9.1 Introduction 411

9.2 Construction of the Carbon Backbone 411

9.3 Introduction of the Nitrogen Atoms in the Carbon Backbone 425

9.4 Conclusions 433

9.5 Experimental Procedures 434

References 435

10 Synthesis of Halogenated a-Amino Acids 441
Madeleine Strickland and Christine L. Willis

10.1 Introduction 441

10.2 Halogenated Amino Acids with a Hydrocarbon Side-Chain 442

10.3 Halogenated Amino Acids with an Aromatic Side-Chain 457

10.4 Halogenated Amino Acids with Heteroatoms in the Aliphatic Side-Chain 463

References 466

11 Synthesis of Isotopically Labeled a-Amino Acids 473
Caroline M. Reid and Andrew Sutherland

11.1 Introduction 473

11.2 Enzyme-Catalyzed Methods 473

11.3 Chiral Pool Approach 477

11.4 Chemical Asymmetric Methods 483

11.5 Conclusions 488

11.6 Experimental Procedures 489

References 491

12 Synthesis of Unnatural/Nonproteinogenic a-Amino Acids 495
David J. Ager

12.1 Introduction 495

12.2 Chemical Methods 497

12.3 Enzymatic Methods 508

12.4 Conclusions 516

12.5 Experimental Procedures 516

References 520

13 Synthesis of g- and d-Amino Acids 527
Andrea Trabocchi, Gloria Menchi, and Antonio Guarna

13.1 Introduction 527

13.2 g-Amino Acids 528

13.3 d-Amino Acids 547

13.4 Conclusions 566

References 567

14 Synthesis of g-Aminobutyric Acid Analogs 573
Jane R. Hanrahan and Graham A.R. Johnston

14.1 Introduction 573

14.2 a-Substituted g-Amino Acids 575

14.3 b-Substituted g-Amino Acids 579

14.4 g-Substituted g-Amino Acids 592

14.5 Halogenated g-Amino Acids 599

14.6 Disubstituted g-Amino Acids 600

14.7 Trisubstituted g-Amino Acids 604

14.8 Hydroxy-g-Amino Acids 605

14.9 Unsaturated g-Amino Acids 640

14.10 Cyclic g-Amino Acids 644

14.11 Conclusions 666

14.12 Experimental Procedures 666

References 677

Index 691

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Author Information

Andrew Hughes is a reader and Head of the Department of Chemistry, La Trobe University, Melbourne, Australia. He obtained his degrees from the University of Western Australia before taking up post-doctoral appointments at the University of Cambridge starting 1989. After three years working with Professor Andrew Holmes, he joined Professor Steven Ley's group in 1993. While at Cambridge he was appointed the Shell Research Fellow at Robinson College. His interests lie in the general field of asymmetric synthesis and methodology, with a recent focus on amino acid chemistry.
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Reviews

"The presentation of selected typical experimental procedures is very welcome ... .Provides concise information from the point of view of experts working in the fields, and critically selecting the important recent literature." (ChemBioChem, March 2010)
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Press Release

September 15, 2009
Amino Acids, Peptides and Proteins in Organic Chemistry: Volume 1 – Origins and Synthesis of Amino Acids

Wiley-VCH is proud to have published the first volume in a benchmark series focusing on amino acid chemistry. Amino Acids, Peptides and Proteins in Organic Chemistry Volume 1 – Origins and Synthesis of Amino Acids closes a gap in the literature.

Amino acids, peptides and proteins are fundamental molecules of life, ubiquitous in every field of biology and biochemistry and in organic chemistry. The synthesis, analysis and application in catalysis and other areas is currently one of the most interesting and important fields of research.

This book series is unique in its field. Amino Acids, Peptides and Proteins in Organic Chemistry provides comprehensive coverage of hot topics, with this first volume focusing on the origins and synthesis of amino acids.  It seeks to provide the reader with a comprehensive discussion of the occurrence, uses and applications of amino acids and by extension their polymeric forms, peptides and proteins.

This authoritative new series comes from the international “who’s who” of amino acid research. The author, Andrew Hughes, is a renowned international expert, drawing also on the expertise of many acclaimed scientists, both industrial and academic, from around the world.

Amino Acids, Peptides and Proteins in Organic Chemistry Volume 1 – Origins and Synthesis of Amino Acids should be found on every bookshelf. Alongside its comprehensive coverage of the topic, it contains a lot of practical information as well as experimental procedures. It will prove invaluable to organic chemists, biochemists, protein chemists, biotechnologists, and chemists in industry.

 

CONTENTS

 

PART I: Origins of Amino Acids
Extraterrestrial Amino Acids
Terrestrial Amino Acids and their Evolution


PART II: Production/Synthesis of Amino Acids
Use of Enzymes in the Synthesis of Amino Acids
Beta-Amino Acid Biosynthesis
Methods for the Chemical Synthesis of Noncoded Alpha-Amino Acids Found in Natural Product Peptides
Synthesis of N-Alkyl Amino Acids
Recent Developments in the Synthesis of Beta-Amino Acids
Synthesis of Carbocyclic Beta-Amino Acids
Synthetic Approaches to Alpha, Beta-Diamino Acids
Synthesis of Halogenated Alpha-Amino Acids
Synthesis of Isotopically Labeled Alpha-Amino Acids
Synthesis of Unnatural/Nonproteinogenic Alpha-Amino Acids
Synthesis of Gamma and Delta-Amino Acids
Synthesis of Gamma-Aminobutyric Acid Analog

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