Textbook of
Biochemistry
With Clinical
Correlations, Fourth Edition
About the Editor Thomas M. Devlin, Ph.D.
Foreword by Frank Vella Frank Vella, M.D., Ph.D., M.A.,
D.Sc.(Honorary) Since 1971, Dr. Vella has been Professor of
Biochemistry at the University of Saskatchewan, Canada. He
received his early training in Malta and is a former Rhodes
School. He is a recognized pioneer in the study of
hemoglobinopathies, thalassemias, and erythrocyte enzymopathies.
Professor Vella has received teaching awards from his University
and is recognized as an outstanding speaker on educational
approaches in biochemistry. As Chairman of the Committee on
Education of the International Union of Biochemistry and
Molecular Biology from 1982 to 1991, he organized and directed
Workshops in twenty countries around the world. Dr. Vella has had
a major impact on the development of biochemical education in
many developing countries.
These are very exciting times for
biochemistry and especially for that part that pertains to human
biology and human medicine. The much discussed Human Genome
Project is likely to be completed very early in the next
millennium, by the time most users of Textbook of
Biochemistry With Clinical Correlations have graduated.
The Human Genome Project should provide a blueprint of the
100,000 or so genes that the human genome is estimated to contain
and lead to an explosion of amazing proportions in knowledge on
complex physiological processes and multigenic disorders. This
mapping will reveal undreamed of interrelationships and elucidate
control mechanisms of the fundamental processes of development of
the human organism and of their interactions with both milieus
(the internal and external). Already, one eukaryotic genome (that
of brewers yeast, comprising 14 million base pairs in 16
chromosomes) was completed just before I set out to write this
Foreword, while three microbial genomes (that of Mycoplasma
genitalium- 580,070 base pairs; - Hemophilus influenzae- 1.83
million base pairs; and Synechosystis- a photosynthetic
organism- 3.57 million base pairs) have been completed within 3
to 18 months of isolation of their DNA. Work on the genomes of Mycobacterium
tuberculosis (4.5 million base pairs) and of Plasmodium
falciparum- the malarial parasite (27 million base pairs in
14 chromosomes)- is now being undertaken, and should lead to
knowledge that can produce novel approaches to the treatment and
control of these two scourges of humankind. The theoretical and
technical principles involved in this type of work are clearly
described in chapters 14, 15 and 18 of Textbook of
Biochemistry With Clinical Correlations which will ensure
that readers will understand and appreciate future developments
in the field. Discoveries on the molecular basis of human
disease are also being reported at an unprecedented and dizzying
rate, opening wider and wider the window to many less frequent
afflictions produced by mutated genes accumulating in the human
gene pool. The era of molecular medicine has already arrived.
Since the very first edition of Textbook of Biochemistry
With Clinical Correlations, the correlations have been a
feature that has made the book truly unique. In this new edition
of the book, the correlations are numerous, succinct and
integrated with , but also independent of, the text. They not
only reflect current progress but indicate more than ever before,
how Biochemistry, Molecular Biology and Human Genetics have
become the foundation stones of all areas of modern Medicine.
These previously separate disciplines have become so intimately
and inextricably intertwined that little knowledge and
understanding of one can occur without knowledge and
understanding of others. One of the many strengths of this book
is that clear examples of the convergence and integration of
biological disciplines can be found in the clinical correlations. In this fourth edition of Textbook of
Biochemistry With Clinical Correlations, the contributors
have provided an up-to-date, and logical coverage of basic
biochemistry, molecular biology, and normal and abnormal aspects
of physiological chemistry. This material is very appropriate and
relevant for medical and other health science students,
particularly as we approach the third millennium in the midst of
amazing and pervasive progress in medical science and
biotechnology. To enhance the text, a completely new series of
vivid illustrations has been added, which will undoubtedly
further the readers understanding of the complexity of many
of the concepts. Students of medical and health sciences should
appreciate that the time and effort invested in learning the
material presented in Textbook of Biochemistry With
Clinical Correlations, will be very well spent. This
knowledge will provide the framework within which further
developments will be understood and applied as the readers begin
to care for the physical and mental well-being of those entrusted
to them. Furthermore, the knowledge derived from this book will
also provide satisfying insight into the processes that underlie
human life and the amazing power of the human mind to explore and
understand it. As in previous editions, the fourth edition
includes many multiple choice questions (and answers) at the end
of each chapter that should facilitate this learning while
ensuring success in professional and other examinations. I am happy and privileged to have watched
the growth of human biochemistry (because of my teaching and
research responsibilities) since my medical student days nearly
half-a-century ago. It has been an amazing spectacle, full of
thrills and exciting adventures into aspects of human cells that
were previously shrouded in mystery and ignorance. As my
knowledge has increased so has my sense of awe and wonder at the
unfolding beauty of this marvelous display of natures
secrets. As the late Alberto Sols frequently said:
"The Biochemistry of today is the Medicine of
tomorrow". Textbook of Biochemistry With Clinical
Correlations illustrates the veracity of this insight.
Preface Copyright © 1997 Wiley-Liss, Inc.
The purposes of the Fourth edition of the
Textbook of Biochemistry With Clinical Correlations remain
unchanged from the earlier editions: to present a clear
discussion of the biochemistry of mammalian cells; to relate the
biochemical events at the cellular level to the physiological
processes occurring in the whole animal; and to cite examples of
deviant biochemical processes in human disease. The continued rapid advances in knowledge,
particularly due to the techniques of molecular biology, required
a critical review and evaluation of the entire content of the
previous edition. Every chapter has been revised and updated.
Significant additions of new material, clarifications, and some
deletions were made throughout. Amino acid metabolism was
combined into a single chapter and DNA structure and function was
divided into two chapters for better coverage of this rapidly
expanding field. Topics for inclusion were selected to cover the
essential areas of both biochemistry and physiological chemistry
for upper-level undergraduate, graduate-level and especially
professional school courses in biochemistry. Since the
application of biochemistry is so important to human medicine,
the text has an overriding emphasis on the biochemistry of
mammalian cells. The textbook is written such that any
sequence considered most appropriate by an instructor can be
presented. It is not formally divided into major sections, but
related topics are grouped together. After an introductory
chapter on cell structure, chapters two to five concern the Major
Structural Components of Cells, that is proteins and their
many functions, and cell membranes and their major roles.
Metabolism is discussed in the following eight chapters,
starting with the conservation of energy, then the synthesis and
degradation of the major cellular components, and concluding with
a chapter on the integration of these pathways in humans. The
next section of six chapters covers Information Transfer and
Its Control, describing the structure and synthesis of the
major cellular macromolecules, that is DNA, RNA, and protein. A
separate chapter on Biotechnology is included because
information from this area has had such a significant impact on
the development of our current state of biochemical knowledge.
The section concludes with a chapter on the Regulation of Gene
Expression, in which mechanisms in both prokaryotes and
eukaryotes are presented. The fourth major section represents Signal
Transduction and Amplification and includes two chapters on
hormones that emphasize their biochemical functions as messengers
and a chapter on Molecular Cell Biology describes four
major mammalian signal transducing systems. The textbook
concludes with six chapters on topics that comprise Physiological
Chemistry, including cytochrome P450 enzymes and xenobiotic
metabolism, iron and heme metabolism, gas transport and pH
regulation, digestion and absorption, and human nutrition. A major addition from previous editions is
the extensive use of color in the illustrations as a means
to emphasize important points. All figures were reviewed and new
drawings were prepared to illustrate the narrative discussion. In
many cases the adage ``A picture is worth a thousand words'' is
appropriate and the reader is encouraged to study the
illustrations because they are meant to illuminate often
confusing aspects of a topic. In each chapter the relevancy of the topic
to human life processes are presented in Clinical Correlations,
which describe the aberrant biochemistry of disease states. A
number of new Correlations have been included. The Correlations
are not intended to review all of the major diseases but rather
to cite examples of disease processes where the biochemical
implications are well established. In addition we specifically
avoided presenting clinical case reports because it was
considered more significant to deal with the general clinical
condition. References are included to facilitate exploration of
the topic in more detail. In some cases similar clinical problems
are presented in different chapters, but each from a different
perspective. All pertinent biochemical information is presented
in the main text, and an understanding of the material does not
require a reading of the Correlations. In a few cases, clinical
discussions are part of the principal text because of the close
relationship of some topics to medical conditions. Each chapter concludes with a set of Questions
and Answers; the multiple-choice format was retained as being
valuable to students for self-assessment of their knowledge. The
question type was limited to the types now occurring in national
examinations. All questions were reviewed and many new ones
added. The questions cover a range of topics in each chapter, and
each has an annotated answer, with references to the page in the
textbook covering the content of the question. The appendix,
Review of Organic Chemistry, is designed as a ready reference
for the nomenclature and structures of organic molecules
encountered in biochemistry and is not intended as a
comprehensive review of organic chemistry. The material is
presented in the Appendix rather than at the beginning of those
chapters dealing with the metabolism of each class of organic
molecules. The reader might find it valuable to become familiar
with the content and then use the Appendix as a ready reference
when reading related sections in the main text. We still believe that a multicontributor
textbook is the best approach to achieve an accurate and current
presentation of biochemistry. Each author is involved actively in
teaching biochemistry in a medical or graduate school and has an
active research interest in the field in which he or she has
written. Thus, each has the perspective of the classroom
instructor, with the experience to select the topics and
determine the emphasis required for students in a course of
biochemistry. Every contributor, however, brings to the book an
individual approach, leading to some differences in presentation.
However, every chapter was critically edited and revised in order
to have a consistent writing style and to eliminate repetitions
and redundancies. A limited repetition of some topics in
different chapters was permitted when it was considered that the
repetition would facilitate the learning process. The individual contributors were requested
to prepare their chapters for a teaching book. The book is
not intended as a compendium of biochemical facts or a review of
the current literature, but each chapter contains sufficient
detail on the subject to make it useful as a resource. Each
contributor was requested not to refer to specific researchers;
our apologies to those many biochemists who rightfully should be
acknowledged for their outstanding research contributions to the
field of biochemistry. Each chapter contains a Bibliography
that can be used as an entry point to the research literature. In any project one person must accept the
responsibility for the final product. The decisions concerning
the selection of topics and format, reviewing the drafts, and
responsibility for the final checking of the book were entirely
mine. I welcome comments, criticisms, and suggestions from the
students, faculty, and professionals who use this textbook. It is
our hope that this work will be of value to those embarking on
the exciting experience of learning biochemistry for the first
time and to those who are returning to a topic in which the
information is expanding so rapidly. Thomas M. Devlin
A special
message from Dr. Devlin
Thomas M. Devlin is Professor Emeritus and former
Chair of the Department of Biochemistry at Hahnemann University
School of Medicine (now Allegheny University), a position he held
for 27 years. As both an active teacher and researcher, Professor
Devlin brings a wealth of practical knowledge and expertise to
the fourth Edition of Textbook of Biochemistry. Recognized for
his research in bioenergetics, Dr. Devlin is widely known for his
participation in biochemistry curriculum development and the
implementation of innovative educational programs throughout the
world. His scholarly service has included serving as Associate
Editor of Biochemical Education, chair of the Medical
Biochemistry Education Board of the Association of Medical and
Graduate School Departments of Biochemistry , membership on the
Committee on Education for the American Society of Biochemistry
and Molecular Biology, and a member of the Test Development
Committee for the National Board of Medical Examiners. Tom Devlin
has participated in Biochemical Education Workshops around the
world and has participated in evaluation of biochemical curricula
at many universities. He has been a member of numerous societies
and organizations, including the American Society of Biochemistry
and Molecular Biology, American Association for Cancer Research,
Society for Experimental Biology and Medicine, American Society
for Cell Biology, and the Biophysical Society. He is a member of
Phi Beta Kappa and Sigma Xi. His previous three editions of the
Textbook of Biochemistry with Wiley have been translated into
several languages around the globe.